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Metazoan complexes |
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Details of hmg-3 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| hmg-3 | --- | O01683 | SSP1B_CAEEL | 172250 | WBGene00001973 | C32F10.5 | FACT complex subunit ssrp1-B | SPROT |
Phenotypes
axon fasciculation variant, axon midline crossing variant, cord commissures fail to reach target, dumpy, embryonic lethal, germ cell compartment expansion variant, germ cell compartment morphology variant, gonad morphology variant, large cytoplasmic granules early emb, larval arrest, larval lethal, late embryonic arrest, lethal, locomotion variant, maternal sterile, meiotic progression prophase variant, multiple nuclei early emb, oocyte number decreased, oogenesis variant, organism morphology variant, rachis morphology variant, rachis narrow, slow growth, small, sterile, sterile F1, sterile progeny, Variant, ventral cord patterning variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| SSRP1 | Ssrp1 | Ssrp | Sp-Ssrp1 | ||||||
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| SSRP1 | PAF1 | 0.939814547 | hmg-3 hmg-4 | C55A6.9 C55A6.9 | cpx764 | no | yes | yes | Known |
| SUPT16H | SSRP1 | 1 | spt-16 spt-16 | hmg-4 hmg-3 | cpx346; cpx350 | yes | yes | yes | Known |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
|---|---|---|---|---|
| SSRP1 | CSNK2B | 0.180292826 | hmg-4, hmg-3 | kin-10 |
| SSRP1 | NAP1L1 | 0.136768917 | hmg-4, hmg-3 | nap-1 |
| CSNK2A1 | SSRP1 | 0.21956292 | kin-3 | hmg-4, hmg-3 |
| NOLC1 | SSRP1 | 0.077254476 | dao-5 | hmg-4, hmg-3 |
| SSRP1 | RTF1 | 0.785584148 | hmg-4, hmg-3 | F25B3.6 |
| LEO1 | SSRP1 | 0.821278616 | B0035.11 | hmg-4, hmg-3 |