Metazoan complexes |
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Emili & Marcotte labs |
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Details of hmg-4 gene in Caenorhabditis elegans
IDs | |||||||||
---|---|---|---|---|---|---|---|---|---|
Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
| hmg-4 | --- | P41848 | SSP1A_CAEEL | 176052 | WBGene00001974 | T20B12.8 | FACT complex subunit SSRP1-A | SPROT |
Phenotypes
embryonic lethal, fewer germ cells, larval arrest, lethal, locomotion variant, maternal sterile, no oocytes, organism development variant, organism morphology variant, protruding vulva, slow growth, thin, Variant.
Orthologs in other species | |||||||||
---|---|---|---|---|---|---|---|---|---|
H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
SSRP1 | Ssrp1 | Ssrp | Sp-Ssrp1 |
Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
---|---|---|---|---|---|---|---|---|---|
SSRP1 | PAF1 | 0.939814547 | hmg-3 hmg-4 | C55A6.9 C55A6.9 | cpx764 | no | yes | yes | Known |
SUPT16H | SSRP1 | 1 | spt-16 spt-16 | hmg-4 hmg-3 | cpx346; cpx350 | yes | yes | yes | Known |
Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
---|---|---|---|---|
SSRP1 | CSNK2B | 0.180292826 | hmg-4, hmg-3 | kin-10 |
SSRP1 | NAP1L1 | 0.136768917 | hmg-4, hmg-3 | nap-1 |
CSNK2A1 | SSRP1 | 0.21956292 | kin-3 | hmg-4, hmg-3 |
NOLC1 | SSRP1 | 0.077254476 | dao-5 | hmg-4, hmg-3 |
SSRP1 | RTF1 | 0.785584148 | hmg-4, hmg-3 | F25B3.6 |
LEO1 | SSRP1 | 0.821278616 | B0035.11 | hmg-4, hmg-3 |