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Details of lin-40 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| lin-40 | --- | Q86S28 | --- | 178788 | --- | T27C4.4 | Protein LIN-40, isoform a [Source:RefSeq peptide Acc:NP_504031] | ENSEMBL |
Phenotypes
age associated fluorescence increased, amphid phasmid morphology variant, cell differentiation variant, developmental delay postembryonic, ectopic expression transgene, egg laying variant, embryonic lethal, embryonic morphology variant, exploded through vulva, extended life span, growth rate variant, larval arrest, larval lethal, lethal, locomotion variant, multivulva, muscle cell development variant, organism development variant, organism morphology variable, organism morphology variant, organism UV hypersensitive, pattern of transgene expression variant, postembryonic development variant, protruding vulva, receptor mediated endocytosis defective, reduced brood size, shortened life span, sick, slow growth, sterile, sterile progeny, transgene expression reduced, Variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| MTA1 | Mta1 | MTA1-like | Sp-Mta1... | MTA2 | Mta2 | MTA1-like | Sp-Mta1... | MTA3 | Mta3 | MTA1-like | Sp-Mta1... |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| CHD3 | MTA1 | 1 | let-418 | lin-40 | cpx57 | yes | yes | yes | Known |
| HDAC1 | MTA1 | 0.971591193 | hda-1 | lin-40 | cpx52 | yes | yes | yes | Known |
| HDAC2 | MTA1 | 0.885658265 | hda-1 | lin-40 | cpx52 | yes | yes | yes | Known |
| MTA3 | MTA1 | 1 | lin-40 | lin-40 | cpx57 | yes | no | no | Known |
| MTA2 | MTA1 | 1 | lin-40 | lin-40 | cpx57 | yes | yes | yes | Known |
| CHD4 | MTA1 | 0.092632435 | let-418 | lin-40 | cpx52 | yes | yes | yes | Known |
| CHD5 | MTA1 | 0.09059352 | let-418 | lin-40 | cpx52 | no | no | no | Novel |
| RBBP4 | MTA2 | 0.120307281 | lin-53 | lin-40 | cpx977 | yes | yes | yes | Known |
| CHD3 | MTA2 | 1 | let-418 | lin-40 | cpx57 | yes | yes | yes | Known |
| CHD4 | MTA2 | 0.086924109 | let-418 | lin-40 | cpx977 | yes | yes | yes | Known |
| MTA3 | MTA2 | 1 | lin-40 | lin-40 | cpx57 | yes | yes | no | Known |
| HDAC2 | MTA2 | 0.943058148 | hda-1 | lin-40 | cpx977 | yes | yes | yes | Known |
| CHD3 | MTA3 | 1 | let-418 | lin-40 | cpx57 | no | yes | no | Known |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
|---|---|---|---|---|
| RBBP4 | MTA1 | 0.152151692 | lin-53 | lin-40 |
| HDAC1 | MTA2 | 0.88843655 | hda-1 | lin-40 |
| HDAC2 | MTA3 | 0.853647492 | hda-1 | lin-40 |
| MYPN | MTA2 | 0.072972766 | F54E2.4 | lin-40 |
| CHD4 | MTA3 | 0.093622926 | chd-3, let-418 | lin-40 |
| HDAC1 | MTA3 | 0.892433435 | hda-1 | lin-40 |
| RBBP4 | MTA3 | 0.12804705 | lin-53 | lin-40 |
| CHD5 | MTA2 | 0.081455392 | chd-3, let-418 | lin-40 |