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Details of pab-1 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| pab-1 | --- | Q9U302 | --- | 172920 | --- | Y106G6H.2 | Protein PAB-1, isoform b [Source:RefSeq peptide Acc:NP_001021710] | ENSEMBL |
Phenotypes
cell membrane organization biogenesis variant, cell proliferation increased, chromosome condensation variant, diplotene progression during oogenesis variant, embryonic lethal, embryo osmotic integrity defective early emb, excess intestinal cells, exploded through vulva, fewer germ cells, germ cell compartment expansion variant, germ cell compartment morphology variant, germ cell compartment multinucleate, germ cell partition morphology variant, germline nuclear positioning variant, gonad morphology variant, gonad vesiculated, growth variant, lethal, lysosome-related organelle morphology variant, maternal sterile, nuclear appearance variant, nuclei small, oocyte accumulation, oocyte morphology variant, oocyte septum formation variant, oocytes small, organism morphology variant, pachytene region organization variant, pattern of transgene expression variant, postembryonic development variant, protruding vulva, RAB-11 recycling endosome localization variant, RAB-11 recycling endosome morphology variant, rachis narrow, receptor mediated endocytosis defective, reduced brood size, reproductive system morphology variant, slow growth, sterile, sterile progeny, transgene subcellular localization variant, transposon silencing variant, Variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| PABPC1 | Pabpc1 | pAbp | Sp-Pabpc1 | PABPC3 | --- | pAbp | Sp-Pabpc1 | PABPC4 | Pabpc4 | pAbp | Sp-Pabpc1 | PABPC1L | ENSMUSG00000054582 | pAbp | Sp-Pabpc1 |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| PABPC1 | EEF1G | 0.084677749 | pab-1 pab-2 | eef-1G eef-1G | cpx968 | no | no | no | Novel |
| PABPC1 | G3BP2 | 0.217213724 | pab-2 pab-1 | K08F4.2 K08F4.2 | cpx33 | no | no | no | Novel |
| PABPC4 | G3BP2 | 0.423046808 | pab-2 pab-1 | K08F4.2 K08F4.2 | cpx33 | no | no | no | Novel |
| PABPC1 | HSPA8 | 0.091607414 | pab-2 pab-1 | hsp-1 hsp-1 | cpx884 | yes | yes | yes | Known |
| PABPC1 | MSI2 | 0.120761453 | pab-2 pab-1 | msi-1 msi-1 | cpx33 | no | no | no | Novel |
| PABPC4 | MSI2 | 0.149181389 | pab-2 pab-1 | msi-1 msi-1 | cpx33 | no | no | no | Novel |
| EIF4G3 | PABPC1 | 0.609437345 | ifg-1 ifg-1 | pab-2 pab-1 | cpx33 | no | yes | yes | Known |
| EIF4E | PABPC1 | 0.755837943 | ife-3 ife-3 | pab-1 pab-2 | cpx33 | no | yes | yes | Known |
| ALYREF | PABPC1 | 0.537629762 | aly-3 aly-2 aly-1 aly-3 | pab-2 pab-1 pab-1 pab-1 | cpx33 | yes | yes | yes | Known |
| PABPC4 | PABPC1 | 0.067449439 | pab-1 pab-2 pab-1 | pab-2 pab-2 pab-1 | cpx33 | no | no | no | Novel |
| EIF4G1 | PABPC1 | 0.585665806 | ifg-1 ifg-1 | pab-2 pab-1 | cpx33 | yes | yes | yes | Known |
| EEF1A1 | PABPC1 | 0.162542531 | eef-1A.2:eef-1A.1 | pab-1:pab-2 | cpx830 | no | yes | yes | Known |
| EIF4E | PABPC3 | 0.561715002 | ife-3 ife-3 | pab-1 pab-2 | cpx101 | no | yes | yes | Known |
| EIF4G1 | PABPC4 | 0.425708957 | ifg-1 ifg-1 | pab-2 pab-1 | cpx33 | no | yes | no | Known |
| ALYREF | PABPC4 | 0.381155345 | aly-3 aly-2 aly-1 aly-3 | pab-2 pab-1 pab-1 pab-1 | cpx33 | no | yes | yes | Known |
| EIF4G3 | PABPC4 | 0.213339551 | ifg-1 ifg-1 | pab-2 pab-1 | cpx33 | no | yes | no | Known |
| EIF4E | PABPC4 | 0.58125644 | ife-3 ife-3 | pab-1 pab-2 | cpx33 | no | yes | yes | Known |
| PABPC4 | RPL39 | 0.148734545 | pab-1 | rpl-39 | cpx33 | no | no | no | Novel |
| PABPC1 | RPL39 | 0.23547196 | pab-1 | rpl-39 | cpx33 | no | no | no | Novel |
| PABPC1 | RPL7A | 0.148285506 | pab-2 pab-1 | rpl-7A rpl-7A | cpx968 | no | no | no | Novel |
| PABPC1 | RPLP2 | 0.091913898 | pab-1 pab-2 | rpa-2 rpa-2 | cpx882 | no | no | no | Novel |
| PABPC1 | RPS16 | 0.16168475 | pab-2 pab-1 | rps-16 rps-16 | cpx831 | no | yes | no | Known |
| PABPC1 | RPS4X | 0.120396798 | pab-1 pab-2 | rps-4 rps-4 | cpx855 | no | yes | no | Known |
| PABPC1 | RPS6 | 0.090744796 | pab-2 pab-1 | rps-6 rps-6 | cpx968 | no | no | no | Novel |
| PABPC1 | RPS9 | 0.064099391 | pab-2 pab-1 | rps-9 rps-9 | cpx943 | no | no | no | Novel |
| PABPC1 | RPL17-C18orf32 | 0.133343622 | pab-1 pab-2 | rpl-17 rpl-17 | cpx968 | no | no | no | Novel |