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Details of rpn-3 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| rpn-3 | --- | Q04908 | PSMD3_CAEEL | 176196 | WBGene00004460 | C30C11.2 | 26S proteasome non-ATPase regulatory subunit 3 | SPROT |
Phenotypes
accumulated germline cell corpses, apoptosis increased, cell cycle slow early emb, cell membrane organization biogenesis variant, chromosome condensation variant, diakinesis progression during oogenesis variant, diplotene region organization variant, embryo delayed at pronuclear contact early emb, embryonic lethal, embryo osmotic pressure sensitive early emb, excessive blebbing early emb, germ cell compartment anucleate, germ cell compartment expansion variant, germ cell compartment morphology variant, germ cell compartment multinucleate, giant oocytes, gonad morphology variant, gonad vesiculated, larval arrest, larval lethal, lethal, lysosome-related organelle morphology variant, maternal sterile, nuclear appearance variant, nuclei enlarged, one cell arrest early emb, oocyte septum formation variant, oocytes lack nucleus, organism hypertonic lethality increased, P0 spindle rotation failure early emb, passage through meiosis defective early emb, peptide uptake by intestinal cell variant, protein aggregation variant, RAB-11 recycling endosome localization variant, RAB-11 recycling endosome morphology variant, rachis absent, rachis morphology variant, rachis narrow, shortened life span, sick, sterile, transgene expression reduced, transgene subcellular localization variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| PSMD3 | Psmd3 | Rpn3 | Sp-Psmd3 | ||||||
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| PSMD3 | PSMD9 | 1 | rpn-3 | psmd-9 | cpx1 | yes | no | no | Known |
| PSMD3 | ADRM1 | 0.1566722 | rpn-3 | C56G2.7 | cpx1 | no | yes | no | Known |
| PSMD3 | NAA15 | 0.410142998 | rpn-3 | hpo-29 | cpx86 | no | yes | no | Known |
| PSMD3 | NAA16 | 0.27022203 | rpn-3 | hpo-29 | cpx86 | no | yes | no | Known |
| PSMD3 | PSMC3 | 1 | rpn-3 | rpt-5 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMC4 | 1 | rpn-3 | rpt-3 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMC2 | 1 | rpn-3 | rpt-1 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMA5 | 0.928677667 | rpn-3 | pas-5 | cpx1 | yes | yes | no | Known |
| PSMD3 | PSMD11 | 1 | rpn-3 | rpn-6.1 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD12 | 1 | rpn-3 | rpn-5 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD13 | 1 | rpn-3 | rpn-9 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD7 | 1 | rpn-3 | rpn-8 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD14 | 1 | rpn-3 | rpn-11 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD2 | 1 | rpn-3 | rpn-1 | cpx1 | yes | yes | yes | Known |
| PSMD8 | PSMD3 | 1 | rpn-12 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMC1 | PSMD3 | 1 | rpt-2 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMD10 | PSMD3 | 1 | F40G9.17 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMC5 | PSMD3 | 1 | rpt-6 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMA3 | PSMD3 | 0.911792877 | pas-7 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMD1 | PSMD3 | 1 | rpn-2 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMD4 | PSMD3 | 1 | rpn-10 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMC6 | PSMD3 | 1 | rpt-4 | rpn-3 | cpx1 | yes | yes | yes | Known |
| PSMD3 | PSMD5 | 1 | rpn-3 | F35G12.12 | cpx1 | yes | no | yes | Known |
| PSMD3 | PSMD6 | 1 | rpn-3 | rpn-7 | cpx1 | yes | yes | yes | Known |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
|---|---|---|---|---|
| PSMD3 | PPIL4 | 0.100775575 | rpn-3 | sig-7 |
| PSMD3 | KIAA1967 | 0.073797434 | rpn-3 | lst-3 |
| PSME4 | PSMD3 | 0.073430716 | C14C10.5 | rpn-3 |
| ATP6V0D1 | PSMD3 | 0.073171766 | vha-16 | rpn-3 |
| PSMD3 | ECM29 | 0.070720279 | rpn-3 | D2045.2 |
| PSMD3 | HEATR1 | 0.135827122 | rpn-3 | toe-1 |
| PSMD3 | MTCH1 | 0.139668622 | rpn-3 | mtch-1 |
| PSMD3 | STOML2 | 0.078545583 | rpn-3 | stl-1 |