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Details of snr-4 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| snr-4 | --- | Q18786 | SMD2_CAEEL | 179639 | WBGene00004917 | C52E4.3 | Probable small nuclear ribonucleoprotein Sm D2 | SPROT |
Phenotypes
apoptosis reduced, cell membrane organization biogenesis variant, cell proliferation increased, cell secretion variant, chromosome condensation variant, diplotene absent during oogenesis, diplotene region organization variant, embryonic arrest, embryonic lethal, excess intestinal cells, germ cell compartment expansion variant, germ cell compartment morphology variant, germ cell compartment size variant, germ cell development variant, germline nuclear positioning variant, gonad migration variant, gonad morphology variant, gonad vesiculated, larval arrest, lethal, locomotion variant, lysosome-related organelle morphology variant, maternal sterile, multivulva, no oocytes, nuclear appearance variant, nuclei small, oocyte number decreased, pachytene progression during oogenesis variant, pachytene region organization variant, pattern of transgene expression variant, P granule localization defective, pleiotropic defects severe early emb, postembryonic development variant, protein aggregation variant, protein subcellular localization variant, RAB-11 recycling endosome localization variant, RAB-11 recycling endosome morphology variant, rachis absent, rachis morphology variant, rachis narrow, receptor mediated endocytosis defective, sick, sterile, transgene subcellular localization variant, Variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| SNRPD2 | Snrpd2 | SmD2 | --- | ||||||
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| SNRPD2 | LUC7L2 | 0.211924007 | snr-4 | B0495.8 | cpx159 | no | yes | yes | Known |
| SNRPD2 | SNRPF | 0.999999821 | snr-4 | cpx696 | yes | no | no | Known | |
| SNRPD2 | SNRPD1 | 0.999999542 | snr-4 | snr-3 | cpx696; cpx159 | yes | yes | yes | Known |
| SNRPD2 | SNRPD3 | 0.936759914 | snr-4 | snr-1 | cpx767 | yes | yes | yes | Known |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
|---|---|---|---|---|
| SNRPD2 | PRPF31 | 0.070526339 | snr-4 | prp-31 |
| SNRPD2 | SNRPG | 0.33808908 | snr-4 | snr-7 |
| PRPF19 | SNRPD2 | 0.327418472 | T10F2.4 | snr-4 |
| SNRPD2 | LSM7 | 0.744106401 | snr-4 | lsm-7 |
| SNRPD2 | SNRNP200 | 0.328769512 | snr-4 | Y46G5A.4 |
| LUC7L | SNRPD2 | 0.135115653 | B0495.8 | snr-4 |
| SNRPD2 | SNRPE | 0.787760955 | snr-4 | snr-6 |