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Metazoan complexes |
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Details of swsn-1 gene in Caenorhabditis elegans
IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Link outs | Gene Name | Alias | Uniprot ID | SwissProt ID | NCBI gene ID | W.Base gene ID | W.Base accession | Description | Source |
|
| swsn-1 | --- | H8ESF4 | --- | 180324 | --- | Y113G7B.23 | Protein SWSN-1, isoform a [Source:RefSeq peptide Acc:NP_001256906] | ENSEMBL |
Phenotypes
dauer constitutive, egg laying defective, embryonic lethal, larval arrest, larval lethal, lethal, maternal sterile, no gut granules, organism morphology variant, protruding vulva, reduced brood size, sick, small, sterile, thin, transgene expression reduced, Variant.
Orthologs in other species | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| H. sapiens | M. musculus | D. melonogaster | S. purpuratus | ||||||
| SMARCC1 | Smarcc1 | mor | Sp-Smarcc2 | SMARCC2 | Smarcc2 | mor | Sp-Smarcc2 | ||
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
Complex ID | Corum | BioGrid | IRefWeb | Novelty |
|---|---|---|---|---|---|---|---|---|---|
| SMARCC1 | ACTL6A | 0.364456687 | swsn-1 | swsn-6 | cpx6 | yes | yes | no | Known |
| SMARCC2 | ACTL6A | 0.191900567 | swsn-1 | swsn-6 | cpx6 | yes | yes | no | Known |
| SMARCC1 | SS18L1 | 1 | swsn-1 | ZK973.9 | cpx669 | no | no | no | Novel |
| SMARCC1 | SMARCE1 | 1 | swsn-1 | swsn-3 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SMARCE1 | 1 | swsn-1 | swsn-3 | cpx6 | yes | yes | yes | Known |
| SMARCA4 | SMARCC1 | 1 | swsn-4 | swsn-1 | cpx6 | yes | yes | yes | Known |
| SMARCA2 | SMARCC1 | 1 | swsn-4 | swsn-1 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SMARCC1 | 1 | swsn-1 | swsn-1 | cpx6 | yes | yes | yes | Known |
| SMARCA4 | SMARCC2 | 1 | swsn-4 | swsn-1 | cpx6 | yes | yes | yes | Known |
| SMARCA2 | SMARCC2 | 1 | swsn-4 | swsn-1 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SMARCD1 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | yes | Known |
| SMARCC1 | SMARCD1 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SMARCD2 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | no | Known |
| SMARCC1 | SMARCD2 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | no | Known |
| SMARCC2 | SMARCD3 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | no | Known |
| SMARCC1 | SMARCD3 | 1 | swsn-1 | ham-3 | cpx6 | yes | yes | no | Known |
| SMARCC1 | SMARCB1 | 1 | swsn-1 | snfc-5 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SMARCB1 | 1 | swsn-1 | snfc-5 | cpx6 | yes | yes | yes | Known |
| SMARCC2 | SS18 | 1 | swsn-1 | ZK973.9 | cpx6 | no | no | no | Novel |
| SMARCC1 | SS18 | 1 | swsn-1 | ZK973.9 | cpx6 | no | no | no | Novel |
| Conserved gene 1 |
Conserved gene 2 |
Conserved score |
C. elegans gene 1 |
C. elegans gene 2 |
|---|---|---|---|---|
| FUBP1 | SMARCC1 | 0.349299643 | C12D8.1, ZK418.9, C36E6.1 | swsn-1 |
| KHSRP | SMARCC2 | 0.435134728 | C12D8.1, ZK418.9, C36E6.1 | swsn-1 |
| FUBP1 | SMARCC2 | 0.517941218 | C12D8.1, ZK418.9, C36E6.1 | swsn-1 |
| DCTN2 | SMARCC2 | 0.073109629 | dnc-2 | swsn-1 |
| METTL13 | SMARCC1 | 0.088880401 | C01B10.8 | swsn-1 |
| SF3A1 | SMARCC1 | 0.095466094 | prp-21 | swsn-1 |
| DCTN2 | SMARCC1 | 0.109711205 | dnc-2 | swsn-1 |
| SMARCC2 | MRE11A | 0.104889112 | swsn-1 | mre-11 |
| DDX17 | SMARCC2 | 0.075321143 | F58E10.3 | swsn-1 |
| SF3A1 | SMARCC2 | 0.112071316 | prp-21 | swsn-1 |
| SMARCC1 | MRE11A | 0.071184421 | swsn-1 | mre-11 |
| KHSRP | SMARCC1 | 0.384256446 | C12D8.1, ZK418.9, C36E6.1 | swsn-1 |
| FUBP3 | SMARCC1 | 0.073842115 | C12D8.1, ZK418.9, C36E6.1 | swsn-1 |